BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F03LP1|AL427927
(846 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig985 1650 0.0
>3x_Contig985
Length = 5529
Score = 1650 bits (826), Expect = 0.0
Identities = 836/846 (98%)
Strand = Plus / Plus
Query: 1 gatctggagggcaaagctcactccctcctgagcaacacaatacgggaaatgtaacatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3386 gatctggagggcaaagctcactccctcctgagcaacacaatacgggaaatgtaacatcta 3445
Query: 61 gttttggtaactctataccggaaataagagctaggctaaagagtgaacgtaagaaagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3446 gttttggtaactctataccggaaataagagctaggctaaagagtgaacgtaagaaagcca 3505
Query: 121 tgatcaatgaatcacttagtaaggaagccaagactaacaaggaagaagctgactatatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3506 tgatcaatgaatcacttagtaaggaagccaagactaacaaggaagaagctgactatatcc 3565
Query: 181 cccaattcgatcatatcttggaacctatttctcacttaataaatgaacctctacctccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3566 cccaattcgatcatatcttggaacctatttctcacttaataaatgaacctctacctccat 3625
Query: 241 cattttaccggtttgttgaaaaggagtataaagctgccaaaacattgaggttacctaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3626 cattttaccggtttgttgaaaaggagtataaagctgccaaaacattgaggttacctaata 3685
Query: 301 aaaggttaaagcttgtttctcgtgaaatcaggcttttactcaaggcagctattgcgaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3686 aaaggttaaagcttgtttctcgtgaaatcaggcttttactcaaggcagctattgcgaaag 3745
Query: 361 gagctctgcataaaaatgattgggatcagcagcacttaacaagagtattttcagcgaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3746 gagctctgcataaaaatgattgggatcagcagcacttaacaagagtattttcagcgaaaa 3805
Query: 421 ctaacggaaatccaataaactcccakkaackkctatkctgtttcttatcccctgaagaaa 480
||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 3806 ctaacggaaatccaataaactcccaggaacggctatgctgtttcttatcccctgaagaaa 3865
Query: 481 aaakaattatcatakatkgcatcccatatkaacaacttggcattkaacgtccaaatgtat 540
||| |||||||||| || ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 3866 aaagaattatcatagatggcatcccatatgaacaacttggcattgaacgtccaaatgtat 3925
Query: 541 caacatctaaagacaatactaacaattaccaagtgatagatcctacttcaatagtaacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3926 caacatctaaagacaatactaacaattaccaagtgatagatcctacttcaatagtaacag 3985
Query: 601 ttgaaacgcagtcaaaggtaccaccgccgcctcctccaattgattctaggccaaccccac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3986 ttgaaacgcagtcaaaggtaccaccgccgcctcctccaattgattctaggccaaccccac 4045
Query: 661 catgggctcagaatgttagaacagcagatcctttgctaaatcagcagatgaatcccaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4046 catgggctcagaatgttagaacagcagatcctttgctaaatcagcagatgaatcccaaag 4105
Query: 721 aatcaccggtaccgtcagtatcgttagaatctcgaatctcaaacttgaacgcaccaagcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4106 aatcaccggtaccgtcagtatcgttagaatctcgaatctcaaacttgaacgcaccaagcc 4165
Query: 781 cttcccccgtacccaagaaaatagctgctcaagatgagaaaagcaggaggctggaaaggc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4166 cttcccccgtacccaagaaaatagctgctcaagatgagaaaagcaggaggctggaaaggc 4225
Query: 841 taaaga 846
||||||
Sbjct: 4226 taaaga 4231
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4988
Number of Sequences: 1807
Number of extensions: 4988
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 846
length of database: 10,358,551
effective HSP length: 16
effective length of query: 830
effective length of database: 10,329,639
effective search space: 8573600370
effective search space used: 8573600370
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)